Specimen entry

Accession number: ZFMK-TIS-9838

Stable URL: https://id.zfmk.de/collection_ZFMK/9838, other formats: rdf, json

Sample origin

Locality description:	Reinstädt, Reinstädter Berg
Sampling plot	Thüringen
Coordinates (WGS 84):	Lat: 50.8165 \| Long: 11.4535 - Map
Collection date:	2012-6-23

Organism

Abax parallelus (Duft., 1812)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5005129)

Identified by: Krebs, Detlef

Identified at 2012-7-18

Order: Coleoptera

Family: Carabidae

Life stage: adult

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_169/41

Preparation method: 96% Ethanol

Collection: GBOL-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-9838

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2013-12-10 14:56:38
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATATTTTATTTTTGGTGCATGAGCAGGAATAGTAGGAACATCCTTAAGAATACTAATTCGAGCTGAATTAGGAAATCCTGGATCATTAATTGGTGACGATCAAATTTATAATGTAATTGTCACTGCACATGCTTTTGTAATAATTTTTTTTATAGTTATGCCAATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCTCCTGATATAGCCTTTCCTCGAATGAATAACATGAGATTTTGACTGCTCCCTCCTTCATTGACCTTGCTCCTTATAAGCAGCATAGTTGAAAGAGGTACTGGCACAGGATGAACAGTTTACCCCCCCCTTTCTAGTAATATTGCCCATAGAGGAGCCTCGGTTGATTTAGCTATTTTTAGTCTTCATTTAGCTGGAATTTCCTCAATTTTAGGAGCTGTAAATTTTATCACTACAATTATTAATATACGATCAGTAGGTATAACATTTGATCGAATACCTTTATTTGTTTGATCAGTAGGAATTACTGCCCTATTACTACTGTTATCACTACCTGTATTAGCAGGAGCTATCACAATACTTCTAACAGATCGAAATTTTAATACTTCATTTTTTGACCCAGCTGGAGGTGGAGATCCTATTCTCTATCAACACTTATTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATATTTTATTTTTGGTGCATGAGCAGGAATAGTAGGAACATCCTTAAGAATACTAATTCGAGCTGAATTAGGAAATCCTGGATCATTAATTGGTGACGATCAAATTTATAATGTAATTGTCACTGCACATGCTTTTGTAATAATTTTTTTTATAGTTATGCCAATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCTCCTGATATAGCCTTTCCTCGAATGAATAACATGAGATTTTGACTGCTCCCTCCTTCATTGACCTTGCTCCTTATAAGCAGCATAGTTGAAAGAGGTACTGGCACAGGATGAACAGTTTACCCCCCCCTTTCTAGTAATATTGCCCATAGAGGAGCCTCGGTTGATTTAGCTATTTTTAGTCTTCATTTAGCTGGAATTTCCTCAATTTTAGGAGCTGTAAATTTTATCACTACAATTATTAATATACGATCAGTAGGTATAACATTTGATCGAATACCTTTATTTGTTTGATCAGTAGGAATTACTGCCCTATTACTACTGTTATCACTACCTGTATTAGCAGGAGCTATCACAATACTTCTAACAGATCGAAATTTTAATACTTCATTTTTTGACCCAGCTGGAGGTGGAGATCCTATTCTCTATCAACACTTATTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	24145
Primer name:	LCO1490
pcr_primer_forward_name:	LCO1490
pcr_primer_forward_sequence:	GGTCAACAAATCATAAAGATATTGG
pcr_primer_reverse_name:	HCO2198
pcr_primer_reverse_sequence:	TAAACTTCAGGGTGACCAAAAAATCA
sequencing_timestamp:	2013-08-12 00:00:00
trace_filename:	E1-ZFMK-TIS-9838__[13071361]LCO1490_A62356_F01_1308008292G.ab1
trace_file_org_length:	262265
trace_file_org_md5:	b0f13500e6b998b7b0557c1fdf45d293
trace_file_enc_length:	349688
trace_file_format:	ABI
trace_id:	20753
sequencing_primer_sequence:	GGTCAACAAATCATAAAGATATTGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	24241
Primer name:	HCO2198
pcr_primer_forward_name:	LCO1490
pcr_primer_forward_sequence:	GGTCAACAAATCATAAAGATATTGG
pcr_primer_reverse_name:	HCO2198
pcr_primer_reverse_sequence:	TAAACTTCAGGGTGACCAAAAAATCA
sequencing_timestamp:	2013-08-12 00:00:00
trace_filename:	E1-ZFMK-TIS-9838__[13071362]HCO2198_A62356_F01_1308008292G.ab1
trace_file_org_length:	263282
trace_file_org_md5:	ccf58397145affbd7ed8969a78beebf1
trace_file_enc_length:	351044
trace_file_format:	ABI
trace_id:	20848
sequencing_primer_sequence:	TAAACTTCAGGGTGACCAAAAAATCA
marker_code:	COI

entry number 1