Specimen entry

Accession number: ZFMK-TIS-8004572

Stable URL: https://id.zfmk.de/collection_ZFMK/8004572, other formats: rdf, json

Sample origin

Sampling plot	Europa
Coordinates (WGS 84):	Lat: 42.66683 \| Long: 44.63032 - Map
Collection date:	2019-7-7
Collected by:	Wipfler, Benedikt

Organism

Coleoptera-8004572

Order: Coleoptera

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_193/6

Collection: GGBC-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-8004572

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2022-04-26 10:43:02
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: CACATTATATTTTCTATTCGGCAGATGAGCCGGTATAGTTGGANCTTCCTTGAGACTACTAATTCGAGCGGAACTAGGAAACCCCGGTACTCTAATTGGTGACGATCAAATCTATAACGTAATTGTTACAGCACATGCTTTTATTATAATTTTCTTTATAGTTATGCCTATCCTTATTGGAGGATTCGGTAACTGACTGGTCCCTTTAATATTAGGAGCTCCTGATATGGCATTCCCACGTATAAATAATATAAGATTTTGACTACTTCCCCCTTCGTTAACTTTACTATTAATAAGAAGAATAGTAGAAAGAGGAGCTGGAACTGGATGAACTGTATATCCTCCTCTATCCTCAAATATCGCCCATGGTGGTGCATCAGTAGACTTGGCTATTTTTAGACTTCACTTAGCCGGAATTTCTTCTATTTTAGGGGCAGTAAATTTCATTACAACAGTAATTAATATACGATCTCCTGGAATAACCTTTGACCGAATACCTCTATTTGTTTGATCAGTAGCTATCACAGCTCTTCTTTTACTTCTTTCATTGCCCGTTTTAGCAGGGGCAATCACTATACTTCTAACTGATCGAAATTTAAATACTTCATTCTTTGACCCTGCAGGGGGAGGAGACCCTATCCTATACCAACATTTATTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

CACATTATATTTTCTATTCGGCAGATGAGCCGGTATAGTTGGANCTTCCTTGAGACTACTAATTCGAGCGGAACTAGGAAACCCCGGTACTCTAATTGGTGACGATCAAATCTATAACGTAATTGTTACAGCACATGCTTTTATTATAATTTTCTTTATAGTTATGCCTATCCTTATTGGAGGATTCGGTAACTGACTGGTCCCTTTAATATTAGGAGCTCCTGATATGGCATTCCCACGTATAAATAATATAAGATTTTGACTACTTCCCCCTTCGTTAACTTTACTATTAATAAGAAGAATAGTAGAAAGAGGAGCTGGAACTGGATGAACTGTATATCCTCCTCTATCCTCAAATATCGCCCATGGTGGTGCATCAGTAGACTTGGCTATTTTTAGACTTCACTTAGCCGGAATTTCTTCTATTTTAGGGGCAGTAAATTTCATTACAACAGTAATTAATATACGATCTCCTGGAATAACCTTTGACCGAATACCTCTATTTGTTTGATCAGTAGCTATCACAGCTCTTCTTTTACTTCTTTCATTGCCCGTTTTAGCAGGGGCAATCACTATACTTCTAACTGATCGAAATTTAAATACTTCATTCTTTGACCCTGCAGGGGGAGGAGACCCTATCCTATACCAACATTTATTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	270063
Primer name:	LCO1490-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2021-06-07 00:00:00.0000000
trace_filename:	ZFMK-TIS-8004572__LCO1490-JJ__B07_2106010850G.ab1
trace_file_org_length:	215298
trace_file_org_md5:	95019e9f8e99a6c3850bddf91f3e1388
trace_file_enc_length:	287064
trace_file_format:	ABI
trace_id:	234727
sequencing_primer_sequence:	CHACWAAYCATAAAGATATYGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	270159
Primer name:	HCO2198-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2021-06-07 00:00:00.0000000
trace_filename:	ZFMK-TIS-8004572__HCO2198-JJ__B07_2106010850G.ab1
trace_file_org_length:	215708
trace_file_org_md5:	0b62e15d3054ec0ebb36296e9206142c
trace_file_enc_length:	287612
trace_file_format:	ABI
trace_id:	234809
sequencing_primer_sequence:	AWACTTCVGGRTGVCCAAARAATCA
marker_code:	COI

entry number 1