Specimen entry

Accession number: ZFMK-TIS-8004062

Stable URL: https://id.zfmk.de/collection_ZFMK/8004062, other formats: rdf, json

Sample origin

Locality description:	Lentekhi, hill with antennae on top, 3.5km SE of Lentekhi
Sampling plot	Europa
Coordinates (WGS 84):	Lat: 42.7752 \| Long: 42.7608 - Map
Collection date:	2018-7-25

Organism

Plutella xylostella (Linnaeus, 1758)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5413076)

Identified by: BOLD

Lepidoptera-8004062

Previous Identifications (expand +)

Order: Lepidoptera

Family: Plutellidae

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_1374/59

Preparation method: 96% pure Georgian ethanol

Collection: GGBC-Lepidoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-8004062

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2018-11-22 10:13:11
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATATTTTTTATTTGGAATTTGATCAGGAATATTAGGAACTTCACTAAGTTTATTAATTCGTGCAGAATTAGGAAACCCAGGATCTTTAATTGGAGATGATCAAATTTATAATACAATTGTGACCGCTCATGCATTTATTATAATTTTCTTTATAGTTATACCTATTGTTATTGGAGGATTCGGAAATTGACTTATCCCATTAATATTAGGAGCTCCTGATATAGCTTTTCCTCGAATAAATAATATAAGATTTTGACTACTTCCCCCCTCATTAACCTTATTAATTTCCAGAAGAATTGTTGAAAATGGAGCAGGTACTGGATGAACTGTTTATCCTCCTTTATCTTCAAATATCGCTCATAGAGGAAGATCTGTCGATTTAGCTATTTTTTCTCTTCATTTAGCCGGTATTTCTTCAATTTTAGGAGCAATTAATTTTATTACGACTATTATTAATATAAAAAGAAATGGAATGTCATTTGATCGTATACCTTTATTTGTTTGAGCTGTAGGAATTACAGCTATTTTATTATTGCTATCTCTACCAGTTTTAGCAGGAGCTATTACTATATTATTAACAGATCGAAACTTAAATACTTCCTTCTTTGATCCTGCAGGAGGGGGAGATCCTATTTTATACCAACATTTATTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATATTTTTTATTTGGAATTTGATCAGGAATATTAGGAACTTCACTAAGTTTATTAATTCGTGCAGAATTAGGAAACCCAGGATCTTTAATTGGAGATGATCAAATTTATAATACAATTGTGACCGCTCATGCATTTATTATAATTTTCTTTATAGTTATACCTATTGTTATTGGAGGATTCGGAAATTGACTTATCCCATTAATATTAGGAGCTCCTGATATAGCTTTTCCTCGAATAAATAATATAAGATTTTGACTACTTCCCCCCTCATTAACCTTATTAATTTCCAGAAGAATTGTTGAAAATGGAGCAGGTACTGGATGAACTGTTTATCCTCCTTTATCTTCAAATATCGCTCATAGAGGAAGATCTGTCGATTTAGCTATTTTTTCTCTTCATTTAGCCGGTATTTCTTCAATTTTAGGAGCAATTAATTTTATTACGACTATTATTAATATAAAAAGAAATGGAATGTCATTTGATCGTATACCTTTATTTGTTTGAGCTGTAGGAATTACAGCTATTTTATTATTGCTATCTCTACCAGTTTTAGCAGGAGCTATTACTATATTATTAACAGATCGAAACTTAAATACTTCCTTCTTTGATCCTGCAGGAGGGGGAGATCCTATTTTATACCAACATTTATTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	246819
Primer name:	LCO1490-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2018-10-29 00:00:00
trace_filename:	ZFMK-TIS-8004062__LCO1490-JJ__E12_1811101493G.ab1
trace_file_org_length:	254215
trace_file_org_md5:	ed66be7034cf7ed7c770d7520601f9d5
trace_file_enc_length:	338956
trace_file_format:	ABI
trace_id:	212988
sequencing_primer_sequence:	CHACWAAYCATAAAGATATYGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	246915
Primer name:	HCO2198-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2018-10-29 00:00:00
trace_filename:	ZFMK-TIS-8004062__HCO2198-JJ__E12_1811101493G.ab1
trace_file_org_length:	254013
trace_file_org_md5:	4fcc4acfdde30e7cdd04db7781c14a13
trace_file_enc_length:	338684
trace_file_format:	ABI
trace_id:	213083
sequencing_primer_sequence:	AWACTTCVGGRTGVCCAAARAATCA
marker_code:	COI

entry number 1