Specimen entry

Accession number: ZFMK-TIS-6856

Stable URL: https://id.zfmk.de/collection_ZFMK/6856, other formats: rdf, json

Sample origin

Locality description:	Kottenforst
Sampling plot	Nordrhein-Westfalen
Coordinates (WGS 84):	Lat: 50.6749 \| Long: 7.0775 - Map
Collection date:	2012-5-24

Organism

Abax parallelepipedus (Pill.Mitt., 1783)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5005128)

Identified by: Schmidt, Joachim

Identified at 2013-3-25

Order: Coleoptera

Family: Carabidae

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_50/21

Collection: GBOL-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-6856

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2014-01-20 12:17:05
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATACTTTATTTTTGGTGCATGGTCAGGAATAGTCGGAACCTCTTTAAGAATGTTAATTCGACTTGAATTAGGAAACCCTGGGTCACTAATTGGTGATGACCAAATTTATAATGTAATTGTTACTGCACATGCATTTGTAATAATTTTTTTTATAGTAATGCCTATTATAATTGGAGGTTTCGGAAACTGACTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTCCCTCGAATAAATAACATGAGATTCTGACTGCTCCCCCCTTCTTTAACCCTTCTCCTTATAAGCAGCATAGTTGAGAGAGGAGCTGGCACAGGTTGAACAGTTTACCCACCACTTTCTTCTAATATTGCCCATAGAGGAGCCTCAGTTGACCTAGCTATTTTTAGTCTACATTTAGCTGGAATTTCTTCAATTTTAGGAGCTGTAAATTTTATTACTACAATTATCAATATACGATCTGTAGGAATAACTTTTGACCGAATACCTTTATTTGTCTGATCAGTAGGAATTACTGCTCTGTTACTATTACTATCATTACCTGTATTAGCTGGAGCAATCACAATACTTCTAACAGATCGAAATTTAAATACTTCATTTTTTGATCCTGCAGGAGGTGGAGACCCAATTTTATACCAACATTTATTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATACTTTATTTTTGGTGCATGGTCAGGAATAGTCGGAACCTCTTTAAGAATGTTAATTCGACTTGAATTAGGAAACCCTGGGTCACTAATTGGTGATGACCAAATTTATAATGTAATTGTTACTGCACATGCATTTGTAATAATTTTTTTTATAGTAATGCCTATTATAATTGGAGGTTTCGGAAACTGACTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTCCCTCGAATAAATAACATGAGATTCTGACTGCTCCCCCCTTCTTTAACCCTTCTCCTTATAAGCAGCATAGTTGAGAGAGGAGCTGGCACAGGTTGAACAGTTTACCCACCACTTTCTTCTAATATTGCCCATAGAGGAGCCTCAGTTGACCTAGCTATTTTTAGTCTACATTTAGCTGGAATTTCTTCAATTTTAGGAGCTGTAAATTTTATTACTACAATTATCAATATACGATCTGTAGGAATAACTTTTGACCGAATACCTTTATTTGTCTGATCAGTAGGAATTACTGCTCTGTTACTATTACTATCATTACCTGTATTAGCTGGAGCAATCACAATACTTCTAACAGATCGAAATTTAAATACTTCATTTTTTGATCCTGCAGGAGGTGGAGACCCAATTTTATACCAACATTTATTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	31993
Primer name:	LCO1490
pcr_primer_forward_name:	LCO1490
pcr_primer_forward_sequence:	GGTCAACAAATCATAAAGATATTGG
pcr_primer_reverse_name:	Nancy
pcr_primer_reverse_sequence:	CCCGGTAAAATTAAAATATAAACTTC
sequencing_timestamp:	2013-05-29 00:00:00
trace_filename:	B3_ZFMK-TIS-6856__[1304127]LCO1490_A55145_B03_1305115521G.ab1
trace_file_org_length:	273043
trace_file_org_md5:	12c703646a8b643b1700be4bd74698ab
trace_file_enc_length:	364060
trace_file_format:	ABI
trace_id:	28076
sequencing_primer_sequence:	GGTCAACAAATCATAAAGATATTGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	32089
Primer name:	Nancy
pcr_primer_forward_name:	LCO1490
pcr_primer_forward_sequence:	GGTCAACAAATCATAAAGATATTGG
pcr_primer_reverse_name:	Nancy
pcr_primer_reverse_sequence:	CCCGGTAAAATTAAAATATAAACTTC
sequencing_timestamp:	2013-05-29 00:00:00
trace_filename:	B3_ZFMK-TIS-6856__[1304128]Nancy_A55145_B03_1305115521G.ab1
trace_file_org_length:	278214
trace_file_org_md5:	89c189f930117a98a445352640312544
trace_file_enc_length:	370952
trace_file_format:	ABI
trace_id:	28266
sequencing_primer_sequence:	CCCGGTAAAATTAAAATATAAACTTC
marker_code:	COI

entry number 1