Specimen entry

Accession number: ZFMK-TIS-2000825

Stable URL: https://id.zfmk.de/collection_ZFMK/2000825, other formats: rdf, json

Sample origin

Locality description:	Schwarzes Fließ, DBF 250
Sampling plot	Brandenburg
Coordinates (WGS 84):	Lat: 51.90741 \| Long: 14.58554 - Map
Collection date:	--

Organism

Abax parallelepipedus (Pill.Mitt., 1783)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5005128)

Identified by: Teuscher, Michael

Order: Coleoptera

Family: Carabidae

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_544/F07

Collection: GBOL-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-2000825

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2016-06-22 13:11:12
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATACTTTATTTTTGGTGCATGATCAGGAATAGTCGGAACCTCTTTAAGAATGTTAATTCGACTTGAATTAGGAAATCCTGGATCACTAATTGGTGATGACCAAATTTATAATGTAATTGTTACTGCACATGCATTTGTAATAATTTTTTTTATAGTAATGCCTATTATAATTGGAGGTTTCGGAAACTGATTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTCCCTCGAATAAATAACATGAGATTCTGACTGCTCCCCCCTTCTTTAACCCTTCTCCTTATAAGCAGCATAGTTGAGAGAGGAGCTGGCACAGGATGGACAGTTTACCCACCACTTTCTTCTAATATTGCCCATAGAGGAGCCTCAGTTGACCTAGCTATTTTTAGTCTACATTTAGCTGGAATTTCTTCAATTTTAGGAGCTGTAAATTTTATTACTACAATTATCAATATACGATCTGTAGGAATAACTTTTGACCGAATACCTTTATTTGTCTGATCAGTAGGAATTACTGCTCTGTTACTATTACTATCATTACCTGTATTAGCTGGAGCAATCACAATACTTCTAACAGATCGAAATTTAAATACTTCATTTTTTGATCCTGCAGGAGGTGGAGATCCAATTTTATACCAACATTTGTTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATACTTTATTTTTGGTGCATGATCAGGAATAGTCGGAACCTCTTTAAGAATGTTAATTCGACTTGAATTAGGAAATCCTGGATCACTAATTGGTGATGACCAAATTTATAATGTAATTGTTACTGCACATGCATTTGTAATAATTTTTTTTATAGTAATGCCTATTATAATTGGAGGTTTCGGAAACTGATTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTCCCTCGAATAAATAACATGAGATTCTGACTGCTCCCCCCTTCTTTAACCCTTCTCCTTATAAGCAGCATAGTTGAGAGAGGAGCTGGCACAGGATGGACAGTTTACCCACCACTTTCTTCTAATATTGCCCATAGAGGAGCCTCAGTTGACCTAGCTATTTTTAGTCTACATTTAGCTGGAATTTCTTCAATTTTAGGAGCTGTAAATTTTATTACTACAATTATCAATATACGATCTGTAGGAATAACTTTTGACCGAATACCTTTATTTGTCTGATCAGTAGGAATTACTGCTCTGTTACTATTACTATCATTACCTGTATTAGCTGGAGCAATCACAATACTTCTAACAGATCGAAATTTAAATACTTCATTTTTTGATCCTGCAGGAGGTGGAGATCCAATTTTATACCAACATTTGTTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	160070
Primer name:	LCO1490-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2016-06-01 00:00:00
trace_filename:	ZFMK-TIS-2000825__LCO1490-JJ_A63544_C01_1606140903G.ab1
trace_file_org_length:	254683
trace_file_org_md5:	515430768cb930c9ddc8434009b767de
trace_file_enc_length:	339580
trace_file_format:	ABI
trace_id:	137991
sequencing_primer_sequence:	CHACWAAYCATAAAGATATYGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	159974
Primer name:	HCO2198-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2016-06-01 00:00:00
trace_filename:	ZFMK-TIS-2000825__HCO2198-JJ_A63544_C01_1606140903G.ab1
trace_file_org_length:	263312
trace_file_org_md5:	99caaca2c549f7dddb3a2bf337bbb848
trace_file_enc_length:	351084
trace_file_format:	ABI
trace_id:	137898
sequencing_primer_sequence:	AWACTTCVGGRTGVCCAAARAATCA
marker_code:	COI

entry number 1

https://media.leibniz-lib.de/eaurls/image/80667/full/small/0/ZFMK_2000825.png

Licensed with: by Zoological Research Museum Alexander Koenig