Specimen entry

Accession number: ZFMK-TIS-17254

Stable URL: https://id.zfmk.de/collection_ZFMK/17254, other formats: rdf, json

Sample origin

Locality description:	Sandgrube
Sampling plot	Rheinland-Pfalz
Coordinates (WGS 84):	Lat: 50.3440 \| Long: 7.4260 - Map
Collection date:	2012-7-24
Collected by:	Ahrens, Dirk

Organism

Abax parallelepipedus (Pill.Mitt., 1783)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5005128)

Identified by: Schmidt, Joachim

Identified at 2013-4-11

Order: Coleoptera

Family: Carabidae

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_52/1

Preparation method: Ethanol

Collection: GBOL-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-17254

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2013-12-10 14:58:16
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATACTTTATTTTTGGTGCATGATCAGGAATAGTCGGAACCTCTTTAAGAATGTTAATTCGACTTGAATTAGGAAACCCTGGGTCACTAATTGGTGATGACCAAATTTATAATGTAATTGTTACTGCACATGCATTTGTAATAATTTTTTTTATAGTAATGCCTATTATAATTGGAGGTTTCGGAAACTGACTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTCCCTCGAATAAATAACATGAGATTCTGACTGCTCCCCCCTTCTTTAACCCTTCTCCTTATAAGCAGCATAGTTGAGAGAGGAGCTGGCACAGGTTGAACAGTTTACCCACCACTTTCTTCTAATATTGCCCATAGAGGAGCCTCAGTTGACCTAGCTATTTTTAGTCTACATTTAGCTGGAATTTCTTCAATTTTAGGAGCTGTAAATTTTATTACTACAATTATCAATATACGATCTGTAGGAATAACTTTTGACCGAATACCTTTATTTGTCTGATCAGTAGGAATTACTGCTCTGTTACTATTACTATCATTACCTGTATTAGCTGGAGCAATCACAATACTTCTAACAGATCGAAATTTAAATACTTCATTTTTTGATCCTGCAGGAGGTGGAGATCCAATTTTATACCAACATTTATTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATACTTTATTTTTGGTGCATGATCAGGAATAGTCGGAACCTCTTTAAGAATGTTAATTCGACTTGAATTAGGAAACCCTGGGTCACTAATTGGTGATGACCAAATTTATAATGTAATTGTTACTGCACATGCATTTGTAATAATTTTTTTTATAGTAATGCCTATTATAATTGGAGGTTTCGGAAACTGACTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTCCCTCGAATAAATAACATGAGATTCTGACTGCTCCCCCCTTCTTTAACCCTTCTCCTTATAAGCAGCATAGTTGAGAGAGGAGCTGGCACAGGTTGAACAGTTTACCCACCACTTTCTTCTAATATTGCCCATAGAGGAGCCTCAGTTGACCTAGCTATTTTTAGTCTACATTTAGCTGGAATTTCTTCAATTTTAGGAGCTGTAAATTTTATTACTACAATTATCAATATACGATCTGTAGGAATAACTTTTGACCGAATACCTTTATTTGTCTGATCAGTAGGAATTACTGCTCTGTTACTATTACTATCATTACCTGTATTAGCTGGAGCAATCACAATACTTCTAACAGATCGAAATTTAAATACTTCATTTTTTGATCCTGCAGGAGGTGGAGATCCAATTTTATACCAACATTTATTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	22801
Primer name:	LCO1490
pcr_primer_forward_name:	LCO1490
pcr_primer_forward_sequence:	GGTCAACAAATCATAAAGATATTGG
pcr_primer_reverse_name:	HCO2198
pcr_primer_reverse_sequence:	TAAACTTCAGGGTGACCAAAAAATCA
sequencing_timestamp:	2013-07-17 00:00:00
trace_filename:	E1-ZFMK-TIS-17254__[13071361]LCO1490_A55145_E01_1307013185G.ab1
trace_file_org_length:	262448
trace_file_org_md5:	be45ae4934de23f0b6bfacddc179b729
trace_file_enc_length:	349932
trace_file_format:	ABI
trace_id:	19140
sequencing_primer_sequence:	GGTCAACAAATCATAAAGATATTGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	22897
Primer name:	HCO2198
pcr_primer_forward_name:	LCO1490
pcr_primer_forward_sequence:	GGTCAACAAATCATAAAGATATTGG
pcr_primer_reverse_name:	HCO2198
pcr_primer_reverse_sequence:	TAAACTTCAGGGTGACCAAAAAATCA
sequencing_timestamp:	2013-07-17 00:00:00
trace_filename:	E1-ZFMK-TIS-17254__[13071362]HCO2198_A55145_E02_1307013185G.ab1
trace_file_org_length:	262284
trace_file_org_md5:	23342707f7ab78f8178d3e23f4595b19
trace_file_enc_length:	349712
trace_file_format:	ABI
trace_id:	19235
sequencing_primer_sequence:	TAAACTTCAGGGTGACCAAAAAATCA
marker_code:	COI

entry number 1