Specimen entry

Accession number: ZFMK-TIS-14089

Stable URL: https://id.zfmk.de/collection_ZFMK/14089, other formats: rdf, json

Sample origin

Locality description:	Oberaue
Sampling plot	Thüringen
Coordinates (WGS 84):	Lat: 50.9195 \| Long: 11.5881 - Map
Collection date:	2012-7-26

Organism

Zacladus geranii (Payk., 1800)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5004539)

Identified by: Weigel, Andreas

Identified at 2012-7-26

Order: Coleoptera

Family: Curculionidae

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_37/20

Preparation method: 96% Ethanol

Collection: GBOL-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-14089

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2014-10-16 11:21:26
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATATTTTATCTTTGGAAGATGGGCCGGTGCCGCTGGGACTTCTCTAAGAATACTAATTCGAACTGAACTAGGAAACCCGGGGAGATTAATTGGAAATGATCAAATTTATAACTCTATTGTCACAGCCCACGCTTTCATTATAATTTTTTTTATAGTAATACCAATTTTAATTGGAGGATTTGGAAACTGGCTCGTACCCTTAATACTAGGGGCACCTGATATAGCATTTCCACGACTTAACAATATAAGATTTTGACTATTACCCCCCTCACTTACCTTACTATTAATAAGAAGAATTATTAATAAAGGAGCCGGAACTGGATGAACAGTATACCCACCACTTTCAGCAAATGTTGCACATGAAGGAGCTTCTGTAGACTTAGCAATTTTCAGACTACATATAGCAGGAATTTCATCTATTCTGGGAGCAATTAACTTTATTTCAACAATTATAAATATACGACCTAAAGGAATAGACTATGATCAGACCCCTTTATTTGCTTGAGCAGTTATAATTACAGCTATCCTATTACTTCTATCTTTACCAGTTCTGGCAGGAGCTATTACAATATTATTAACAGATCGAAATATTAATACTACATTTTTCGATCCCTCAGGGGGAGGAGACCCAATTTTATACCAACACCTTTTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATATTTTATCTTTGGAAGATGGGCCGGTGCCGCTGGGACTTCTCTAAGAATACTAATTCGAACTGAACTAGGAAACCCGGGGAGATTAATTGGAAATGATCAAATTTATAACTCTATTGTCACAGCCCACGCTTTCATTATAATTTTTTTTATAGTAATACCAATTTTAATTGGAGGATTTGGAAACTGGCTCGTACCCTTAATACTAGGGGCACCTGATATAGCATTTCCACGACTTAACAATATAAGATTTTGACTATTACCCCCCTCACTTACCTTACTATTAATAAGAAGAATTATTAATAAAGGAGCCGGAACTGGATGAACAGTATACCCACCACTTTCAGCAAATGTTGCACATGAAGGAGCTTCTGTAGACTTAGCAATTTTCAGACTACATATAGCAGGAATTTCATCTATTCTGGGAGCAATTAACTTTATTTCAACAATTATAAATATACGACCTAAAGGAATAGACTATGATCAGACCCCTTTATTTGCTTGAGCAGTTATAATTACAGCTATCCTATTACTTCTATCTTTACCAGTTCTGGCAGGAGCTATTACAATATTATTAACAGATCGAAATATTAATACTACATTTTTCGATCCCTCAGGGGGAGGAGACCCAATTTTATACCAACACCTTTTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	72210
Primer name:	LCO1490-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2014-09-25 00:00:00
trace_filename:	ZFMK-TIS-14089__LCO1490-JJ_A63544_A09_1409012365G.ab1
trace_file_org_length:	270956
trace_file_org_md5:	de991491fbd34614301841b3b17cab8b
trace_file_enc_length:	361276
trace_file_format:	ABI
trace_id:	62830
sequencing_primer_sequence:	CHACWAAYCATAAAGATATYGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	72306
Primer name:	HCO2198-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2014-09-25 00:00:00
trace_filename:	ZFMK-TIS-14089__HCO2198-JJ_A63544_A09_1409012365G.ab1
trace_file_org_length:	270592
trace_file_org_md5:	6714b70a989aa0ab6599dae43d7fce3c
trace_file_enc_length:	360792
trace_file_format:	ABI
trace_id:	62917
sequencing_primer_sequence:	AWACTTCVGGRTGVCCAAARAATCA
marker_code:	COI

entry number 1