Specimen entry

Accession number: ZFMK-TIS-8004620

Stable URL: https://id.zfmk.de/collection_ZFMK/8004620, other formats: rdf, json

Sample origin

Sampling plot	Europa
Coordinates (WGS 84):	Lat: 41.26362 \| Long: 46.52612 - Map
Collection date:	2019-7-11
Collected by:	Wipfler, Benedikt

Organism

Coleoptera-8004620

Order: Coleoptera

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_193/34

Collection: GGBC-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-8004620

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2022-04-26 10:42:50
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: TACATTGTACCTAATCTTTGGTGCATGGGCAGGAATAGTAGGANCATCACTTAGTCTACTAATCCGCTCTGAACTCGGAAACCCAGGAACTCTCATTGGAGATGATCAAATCTATAATGTTATTGTTACAGCCCATGCTTTCATTATAATTTTCTTTATAGTGATACCAATTATAATTGGTGGGTTTGGGAATTGGCTTGTACCTCTAATACTAGGGGCCCCCGACATAGCCTTTCCCCGTATAAATAATATGAGATTCTGATTACTCCCTCCGTCTCTTACACTTTTACTAATAAGAAGAATTGTGGAAAATGGTGCTGGAACCGGTTGAACAGTTTACCCTCCACTTTCCTCTAATATTGCTCATGGTGGATCTTCAGTAGATTTAGCCATCTTTAGACTTCACCTAGCAGGAGTCTCATCTATTTTAGGGGCAGTGAATTTCATTACTACTGTCATTAATATGCGACCTGCAGGGATAACGTTTGACCGAATACCTCTCTTTGTATGGGCAGTTGTTATTACTGCGCTTCTCCTGCTTCTTTCCCTCCCAGTTCTTGCTGGAGCAATCACTATACTTTTAACTGACCGGAATCTCAATACATCTTTCTTTGACCCAGCAGGCGGGGGAGATCCAATCTTGTACCAACATCTATTC

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

TACATTGTACCTAATCTTTGGTGCATGGGCAGGAATAGTAGGANCATCACTTAGTCTACTAATCCGCTCTGAACTCGGAAACCCAGGAACTCTCATTGGAGATGATCAAATCTATAATGTTATTGTTACAGCCCATGCTTTCATTATAATTTTCTTTATAGTGATACCAATTATAATTGGTGGGTTTGGGAATTGGCTTGTACCTCTAATACTAGGGGCCCCCGACATAGCCTTTCCCCGTATAAATAATATGAGATTCTGATTACTCCCTCCGTCTCTTACACTTTTACTAATAAGAAGAATTGTGGAAAATGGTGCTGGAACCGGTTGAACAGTTTACCCTCCACTTTCCTCTAATATTGCTCATGGTGGATCTTCAGTAGATTTAGCCATCTTTAGACTTCACCTAGCAGGAGTCTCATCTATTTTAGGGGCAGTGAATTTCATTACTACTGTCATTAATATGCGACCTGCAGGGATAACGTTTGACCGAATACCTCTCTTTGTATGGGCAGTTGTTATTACTGCGCTTCTCCTGCTTCTTTCCCTCCCAGTTCTTGCTGGAGCAATCACTATACTTTTAACTGACCGGAATCTCAATACATCTTTCTTTGACCCAGCAGGCGGGGGAGATCCAATCTTGTACCAACATCTATTC

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	270121
Primer name:	LCO1490-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2021-06-07 00:00:00.0000000
trace_filename:	ZFMK-TIS-8004620__LCO1490-JJ__G05_2106010839G.ab1
trace_file_org_length:	215330
trace_file_org_md5:	8c67f504a6493437cff2fc953b65d70f
trace_file_enc_length:	287108
trace_file_format:	ABI
trace_id:	234774
sequencing_primer_sequence:	CHACWAAYCATAAAGATATYGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	270217
Primer name:	HCO2198-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2021-06-07 00:00:00.0000000
trace_filename:	ZFMK-TIS-8004620__HCO2198-JJ__G05_2106010839G.ab1
trace_file_org_length:	215540
trace_file_org_md5:	8eb9f911939c738120c51df8e800cc15
trace_file_enc_length:	287388
trace_file_format:	ABI
trace_id:	234856
sequencing_primer_sequence:	AWACTTCVGGRTGVCCAAARAATCA
marker_code:	COI