Sample


Accession number: ZFMK-TIS-8000083

Stable URL: https://id.zfmk.de/collection_ZFMK/8000083, other formats: rdf, json

Sample origin
Locality description:Kintrishi Protected Areas
Sampling plotEuropa
Coordinates (WGS 84): Lat: 41.73655 | Long: 41.97871 - Map
Collection date: 2018-7-19
Organism

Pandemis heparana (Denis & Schiffermüller, 1775)

Identified by: BOLD

Lepidoptera-8000083

Previous Identifications (expand +)


Order: Lepidoptera

Family: Tortricidae

Life stage: caterpillar

Number of individuals: 1


Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_1064/29

Preparation method: snap-frozen dry at -180°C, thawed overnight during transport, then transferred into ethanol


Collection: GGBC-Lepidoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-8000083



Analysis Barcode_Analyse161:

Analysis Description:Barcodes for ZFMK using Methods
Analysis date:2018-11-15 13:57:41
Analysis conducted by:GBOL-ZFMKLab

Analysis Result:

Methods:


Barcode

Gene locus: COI

project:
GBOL
sequence_length:
658
trace_count:
2

Consensus sequence:


Sequencing

Sequencing laboratory:BGI
Sequencing direction:forward
Sequence ID:246390
Primer name:LCO1490-JJ
pcr_primer_forward_name:
LCO1490-JJ
pcr_primer_forward_sequence:
CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:
HCO2198-JJ
pcr_primer_reverse_sequence:
AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:
2018-10-29 00:00:00
trace_filename:
ZFMK-TIS-8000083__LCO1490-JJ__B03_1811101718G.ab1
trace_file_org_length:
264200
trace_file_org_md5:
7e6c9017d523eead134d05369c3d33ac
trace_file_enc_length:
352268
trace_file_format:
ABI
trace_id:
212576
sequencing_primer_sequence:
CHACWAAYCATAAAGATATYGG
marker_code:
COI


Sequencing

Sequencing laboratory:BGI
Sequencing direction:reverse