Specimen entry


Accession number: ZFMK-TIS-8004644

Stable URL: https://id.zfmk.de/collection_ZFMK/8004644, other formats: rdf, json

Sample origin
Sampling plotEuropa
Coordinates (WGS 84): Lat: 42.66683 | Long: 44.63032 - Map
Collection date: 2019-7-7
Collected by:
Wipfler, Benedikt
Organism

Harpalus rufipes (De Geer, 1774)

Identified by: BOLD

Identified at 2021-8-17

Coleoptera-8004644

Previous Identifications (expand +)


Order: Coleoptera

Family: Carabidae

Number of individuals: 1


Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_193/42


Collection: GGBC-Coleoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-8004644



Analysis Barcode_Analyse161:

Analysis Description:Barcodes for ZFMK using Methods
Analysis date:2022-04-26 10:42:53
Analysis conducted by:GBOL-ZFMKLab

Analysis Result:

Methods:


Barcode

Gene locus: COI

project:
GBOL
sequence_length:
658
trace_count:
2

Consensus sequence:


Sequencing

Sequencing laboratory:BGI
Sequencing direction:forward
Sequence ID:270138
Primer name:LCO1490-JJ
pcr_primer_forward_name:
LCO1490-JJ
pcr_primer_forward_sequence:
CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:
HCO2198-JJ
pcr_primer_reverse_sequence:
AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:
2021-06-07 00:00:00.0000000
trace_filename:
ZFMK-TIS-8004644__LCO1490-JJ__H10_2106010880G.ab1
trace_file_org_length:
215626
trace_file_org_md5:
4ff5cbe92525229b35b0c02920d720e1
trace_file_enc_length:
287504
trace_file_format:
ABI
trace_id:
234790
sequencing_primer_sequence:
CHACWAAYCATAAAGATATYGG
marker_code:
COI


Sequencing

Sequencing laboratory:BGI
Sequencing direction:reverse
Sequence ID:270234
Primer name:HCO2198-JJ
pcr_primer_forward_name:
LCO1490-JJ
pcr_primer_forward_sequence:
CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:
HCO2198-JJ
pcr_primer_reverse_sequence:
AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:
2021-06-07 00:00:00.0000000
trace_filename:
ZFMK-TIS-8004644__HCO2198-JJ__G08_2106010880G.ab1
trace_file_org_length:
254756
trace_file_org_md5:
8704f33eacaa609d92b269fbeaad6226
trace_file_enc_length:
339676
trace_file_format:
ABI
trace_id:
234872
sequencing_primer_sequence:
AWACTTCVGGRTGVCCAAARAATCA
marker_code:
COI


entry number 1