Specimen entry

Accession number: ZFMK-TIS-8003860

Stable URL: https://id.zfmk.de/collection_ZFMK/8003860, other formats: rdf, json

Sample origin

Locality description:	Chkhakoura - Bakhmaro road
Sampling plot	Europa
Coordinates (WGS 84):	Lat: 41.8607 \| Long: 42.3574 - Map
Collection date:	2018-7-19

Organism

Nomophila noctuella (Denis & Schiffermüller, 1775)

(http://services.snsb.info/DTNtaxonlists/rest/v0.1/names/TaxonNames_Insecta/5410798)

Identified by: BOLD

Lepidoptera-8003860

Previous Identifications (expand +)

Order: Lepidoptera

Family: Crambidae

Number of individuals: 1

Material type: tissue sample

Storage location: ZFMK-Tissue-Bank_1376/3

Preparation method: 96% pure Georgian ethanol

Collection: GGBC-Lepidoptera

Collection Contact: Björn Rulik

Accession number: ZFMK-TIS-8003860

Analysis Barcode_Analyse161:

Analysis Description:	Barcodes for ZFMK using Methods
Analysis date:	2018-11-22 10:13:12
Analysis conducted by:	GBOL-ZFMKLab
Analysis Result: AACATTATATTTTATTTTTGGAATTTGAGCAGGRATAGTAGGAACTTCTTTAAGTTTATTAATTCGAGCTGAATTAGGAAATCCAGGATCATTAATTGGAGATGATCAAATTTATAATACTATTGTAACAGCTCATGCATTTATTATAATTTTTTTTATAGTTATGCCTATTATAATTGGAGGATTTGGTAATTGATTAGTACCTCTTATATTAGGAGCCCCTGATATAGCTTTTCCTCGAATAAATAATATAAGATTTTGACTTTTACCCCCTTCTTTAACTTTATTAATTTCTAGAAGAATTGTTGAAAATGGAGCTGGAACAGGATGAACAGTTTACCCACCCCTTTCATCTAATATTGCTCATGGAGGAAGATCAGTAGATTTAGCAATTTTCTCTTTACATTTAGCTGGAATTTCATCAATTTTAGGAGCTATCAATTTTATTACAACAATTATTAATATACGAATTAATGGATTATCATTTGATCAAATACCTTTATTTGTATGAGCTGTAGGAATTACAGCTTTATTATTACTTTTATCTTTACCTGTTTTAGCTGGAGCAATTACAATATTACTAACAGATCGAAATTTAAATACATCTTTTTTTGATCCTGCAGGAGGTGGAGATCCAATTCTTTATCAACATTTATTT

Methods:

Barcode

Gene locus: COI

project:	GBOL
sequence_length:	658
trace_count:	2

Consensus sequence:

AACATTATATTTTATTTTTGGAATTTGAGCAGGRATAGTAGGAACTTCTTTAAGTTTATTAATTCGAGCTGAATTAGGAAATCCAGGATCATTAATTGGAGATGATCAAATTTATAATACTATTGTAACAGCTCATGCATTTATTATAATTTTTTTTATAGTTATGCCTATTATAATTGGAGGATTTGGTAATTGATTAGTACCTCTTATATTAGGAGCCCCTGATATAGCTTTTCCTCGAATAAATAATATAAGATTTTGACTTTTACCCCCTTCTTTAACTTTATTAATTTCTAGAAGAATTGTTGAAAATGGAGCTGGAACAGGATGAACAGTTTACCCACCCCTTTCATCTAATATTGCTCATGGAGGAAGATCAGTAGATTTAGCAATTTTCTCTTTACATTTAGCTGGAATTTCATCAATTTTAGGAGCTATCAATTTTATTACAACAATTATTAATATACGAATTAATGGATTATCATTTGATCAAATACCTTTATTTGTATGAGCTGTAGGAATTACAGCTTTATTATTACTTTTATCTTTACCTGTTTTAGCTGGAGCAATTACAATATTACTAACAGATCGAAATTTAAATACATCTTTTTTTGATCCTGCAGGAGGTGGAGATCCAATTCTTTATCAACATTTATTT

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	forward
Sequence ID:	246811
Primer name:	LCO1490-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2018-10-29 00:00:00
trace_filename:	ZFMK-TIS-8003860__LCO1490-JJ__E04_1811101429G.ab1
trace_file_org_length:	264091
trace_file_org_md5:	2630cd1b48eac5bb613348e69b794b0b
trace_file_enc_length:	352124
trace_file_format:	ABI
trace_id:	212980
sequencing_primer_sequence:	CHACWAAYCATAAAGATATYGG
marker_code:	COI

Sequencing

Sequencing laboratory:	BGI
Sequencing direction:	reverse
Sequence ID:	246907
Primer name:	HCO2198-JJ
pcr_primer_forward_name:	LCO1490-JJ
pcr_primer_forward_sequence:	CHACWAAYCATAAAGATATYGG
pcr_primer_reverse_name:	HCO2198-JJ
pcr_primer_reverse_sequence:	AWACTTCVGGRTGVCCAAARAATCA
sequencing_timestamp:	2018-10-29 00:00:00
trace_filename:	ZFMK-TIS-8003860__HCO2198-JJ__E04_1811101429G.ab1
trace_file_org_length:	253885
trace_file_org_md5:	96af34d33e78c21e7c26558e90bd6e4f
trace_file_enc_length:	338516
trace_file_format:	ABI
trace_id:	213075
sequencing_primer_sequence:	AWACTTCVGGRTGVCCAAARAATCA
marker_code:	COI

entry number 1